Protein Information

Protein ZmMYB52
ZmMYB52 is a protein in the MYB family.
Information
TF Name:	ZmMYB52
Species:	Maize
TF Family:	MYB
Gene Name(Synonym):	MYB52
Uniprot ID:	B6TCY3
Subgenome:	2

Overview of domains present in v5 transcripts
	PF00249	PF13921
Zm00001eb392230_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d047182	DAPseq	sequence	fimo	position
Zm00001d047182	DAPseq	sequence	fimo	position
Zm00001d047182	ChIPseq	sequence	fimo	position
Zm00001d047182	PChIPseq	sequence	fimo	position

Zm00001eb392230_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

MGRPPCCDKESVKKGPWTPEEDLVLVSYVQEHGPGNWRAVPANTGLLRCSKSCRLRWTNYLRPGIRRGGFSDQEDRLIVH
LQALLGNRWAAIASYLPDRTDNDVKNYWNTHLKKKLLAQQQQQLRASPSPPKGQWELKLQTDINLARRALRDALSIDAGP
PGMAVAGSAAPAPSAGPAAPQQAYALTARSVDRMMLDGWAAAAPAAGRRSCVVGGTVVIPAPATTPGAAESASRSSSELT
TAECSASISSASDQRAAPVADHQLLASEENNYTASAVQQGEVPLSAIESWLLEDAGAGEQKLAHDGPLLDAALHSFGF

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00249
PF13921
PF00249
PF13921
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard

Expand

GAGAGAGAGAGAGAGAGAGAGGTGC...

GAGAGAGAGAGAGAGAGAGAGGTGCCTACCGTACTAGTGGCATCAGGCATGTGTACGCATACGAGTACTACTCCATGTCTGCTCCGATCCCTCCACAACAGATCTCTATGGGTTAATGACTTAATTCTTTGCCATTCTAGCAGTTAAATCACCAACACCCATTAATACTATTAGTTGGGTCACCTACAATCTCCACTAGGTAATCACCAAGCTCCCGATCGACACCAAACCGTCGACCATCAAGAGTAACAAGCACGAACACTCACTTGATCTAAACAAGCCTAATAAGGATGATGGATGCACACTTGTTACTCTGTATGCACTAATTAGGTTCCTAATCTCACGATTTCATCAAATCTTAGACAACCTCACCAGCCAAAGGCTCTATCTATATCTCTAATGTGTTTCTTTGGCAAAAATAAATGGGCAAGAACACTAAAATTAACAAGTTGAAGGGTATTTATACTCCCTAACCACCAAACTAGCAGTTAGAAGAACTCTGGCATGAAAACACATGTGTCCGACCTATTCATAGGGCCCGACAACATGTAGAGCGGACCCTAGCTCCTACAATCATAATGTCTGGCCCGACAGCACACGTCGAATCAGTCCAATGCGTGAAAAACCTCTCTATCTGTTTATGGACTGTGTCGAGCTGAGACGTTATAGTCCGACGACCCTGATACACACAGTCATCTAGCCTTTTTAAACACCCCATGTGTAGGTGCCCAACCAAACTCAATGGTCCGACGACCCTTATTTTTTAGGGTTCAGTGAGACAATGACTATAAAACCCCGCCAAAAACACTTTCTGCAAATGAGATTTGTTCCAAAAGATTTTTAGACCTCTAAGCTAACTAGTGCTAAGGCCACACCTAACACATTAGACTCACTTAGGTCAAGCTATTAATCTATACCCCTTATAGTACATCCAAACGAAACAAATGCCTAAACTAAGTGTCTCTCAACTCTAATCGACACTTAAAACTAGTTTATCCTTAGTCTTGTCGTTTATTCTTTAAATCCGAAACAAAATTTAGTTTTGGAGGCATGAAAATCATTGATTGACTAAACAACCACTATTATTTTGACCTAACTCAAATGCCTCTATAAAACACGTGTTAGTCATAATAATCTTGTGTTGTCATTAGTCACTAAACTCCATTATTAGCCTGAATGCTTTAAATCTTCTTTTTGGTGATTGATGACAACAGTGTCTCAAGTATGTAACGGGTACTAGACTATGCTGCCTCTCTGCCGTACGTCTACTCTGCGTGCAGAGTGAGTGCAGTGTGCACAGGTATATATACACACACACACGCCTCTGGAACCTGAACCTTGTCTTGATTTCTTTTCATACACCATCCACCGGGCGAAGCTGTTGGCCGGCGGCATCGTCGACGACAGACCGCGCGGCGGCGATTCCGACCCATCCATGGGGCGGCCGCCGTGCTGCGACAAGGAGAGCGTGAAGAAGGGGCCGTGGACGCCCGAGGAGGACCTGGTCCTCGTCTCTTACGTCCAGGAGCACGGCCCCGGCAACTGGCGCGCAGTCCCCGCCAACACAGGGCTGCTGCGGTGCAGCAAGAGCTGCCGCCTCCGGTGGACCAACTACCTCCGCCCGGGCATCCGCCGCGGCGGCTTCTCCGACCAGGAGGACAGGCTCATCGTCCACCTCCAGGCGCTCCTCGGCAACCGCTGGGCCGCCATCGCCTCCTACCTCCCCGACCGCACCGACAACGACGTCAAGAACTACTGGAACACGCACCTCAAGAAGAAGCTCCTCGCTCAGCAGCAGCAGCAGCTGCGCGCCTCGCCGTCGCCGCCCAAGGGGCAGTGGGAGCTCAAGCTGCAGACCGACATCAACCTCGCCAGGCGCGCCCTGCGCGACGCCCTCTCCATCGACGCCGGCCCGCCAGGGATGGCCGTCGCGGGCTCGGCGGCGCCGGCGCCGTCCGCCGGCCCAGCAGCGCCACAACAAGCGTACGCTCTCACCGCGCGCAGCGTCGACAGGATGATGCTGGACGGGTGGGCGGCGGCGGCTCCAGCGGCAGGGAGGAGGAGCTGCGTCGTCGGTGGCACCGTCGTCATCCCGGCCCCGGCGACGACGCCCGGCGCGGCCGAGAGCGCGTCGAGGTCGTCGTCGGAGCTAACGACGGCGGAGTGTTCTGCCTCCATCTCCAGCGCCTCCGATCAGCGCGCCGCGCCGGTGGCCGACCACCAGCTGCTCGCGTCCGAGGAGAATAATTATACGGCGTCGGCCGTGCAGCAGGGAGAGGTGCCGCTGTCGGCGATCGAGTCGTGGCTGCTGGAGGACGCCGGCGCCGGCGAGCAGAAGCTGGCGCACGATGGCCCCCTGCTCGATGCCGCGCTGCATAGTTTTGGCTTCTAGTAAAATGTCAAAATGTGTTACTAGAAATCGAGTGTGGTTAATTATGCCAGTCGGTGCCACTACTAGCTAGTCCTTTTCTGCCCTACTAATTTAGCTCACTAGCTGTTCTACTTGTCATCCGTAGTACACAGATGACGATTTGTGTCACTGCATGAAGCAATGTGCAAGTGGGTGATCGTGATATATATACTACGTCGAAAGTGAAATGTAACACGATCCGTCTGCTCGTTTTGTCACTGCATGAAGCAATGTGCAAGTGGGTGTGTCTTTATTGTAGTTTTTGAGAAACGAGTCGTTCTATTTTGCGTTTGTCAAACATATCACATCAGAGTCACTCATTCTTTTGGTTG

GRMZM2G098179_T01 from maize genome v3

Related TFome: pUT4584

Amino Acid Sequence
Copy to clipboard

MGRPPCCDKESVKKGPWTPEEDLVLVSYVQEHGPGNWRAVPANTGLLRCSKSCRLRWTNYLRPGIRRGGFSDQEDRLIVH
LQALLGNRWAAIASYLPDRTDNDVKNYWNTHLKKKLLAQQQQQLRASPSPPKGQWELKLQTDINLARRALRDALSIDAGP
PGMAVAGSAAPAPSAGPAAPQQAYALTARSVDRMMLDGWAAAAPAAGRRSCVVGGTVVIPAPATTPGAAESASRSSSELT
TAECSASISSASDQRAAPVADHQLLASEENNYTASAVQQGEVPLSAIESWLLEDAGAGEQKLAHDGPLLDAALHSFGF

Nucleotide Sequence
Copy to clipboard

Expand

GCCTCTGGAACCTGAACCTTGTCTT...

Zm00001d047182_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MGRPPCCDKESVKKGPWTPEEDLVLVSYVQEHGPGNWRAVPANTGLLRCSKSCRLRWTNYLRPGIRRGGFSDQEDRLIVH
LQALLGNRWAAIASYLPDRTDNDVKNYWNTHLKKKLLAQQQQQLRASPSPPKGQWELKLQTDINLARRALRDALSIDAGP
PGMAVAGSAAPAPSAGPAAPQQAYALTARSVDRMMLDGWAAAAPAAGRRSCVVGGTVVIPAPATTPGAAESASRSSSELT
TAECSASISSASDQRAAPVADHQLLASEENNYTASAVQQGEVPLSAIESWLLEDAGAGEQKLAHDGPLLDAALHSFGF

Nucleotide Sequence
Copy to clipboard

Expand

GAACCTTGTCTTGATTTCTTTTCAT...

Learn About Grassius

Species

Databases

Tools

Help

Protein ZmMYB52

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmMYB52 is the regulator

Interactions where ZmMYB52 is the target
Expand

Zm00001eb392230_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

Nucleotide Sequence
Copy to clipboard

Expand

GRMZM2G098179_T01 from maize genome v3

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

Zm00001d047182_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

About Grassius

Access Data

Tools

Help